In Focus

hCoV-19 Submission Tracking

hCoV-19 Tracking of Variants

Public-Private Partnerships of the GISAID Initiative

The GISAID Initiative involves public-private-partnerships between the Initiative's administrative arm Freunde of GISAID e.V., a registered non-profit association, and governments of the Federal Republic of Germany, the official host of the GISAID platform, Singapore and the United States of America, with support from private and corporate philanthropy. 

Genomic epidemiology of hCoV-19

hCoV-19 data sharing via GISAID

3,795,155

submissions

 

CoronaTrend

The University of Hong Kong (Hong Kong)
Prevalence of different mutations across different lineages

assayM

King Abdullah University of Science & Technology (Saudi Arabia)
Track sensitivity of RT-PCR primers on variants


CoV-Spectrum

Computational Evolution Group, ETH Zurich (Switzerland)
Fully interactive platform to explore and monitor variants of SARS-CoV-2

CoVerage

Helmholtz Centre for Infection Research (Germany)
Epidemiological dynamics of SARS-CoV-2 lineages

CovidTag 

IrsiCaixa AIDS Research Institute (Spain)
Average weekly hCoV-19 variants counts in Spain and Regions

CoVGlobe

The Francis Crick Institute (United Kingdom)
Aggregate three-week rolling averages of lineages in different locations

Regeneron COVID-19 Dashboard

Molecular Profiling & Data Science and Bioinformatics Core Services (USA)
Track current and emerging SARS-CoV-2 variants with customizable visualizations

Outbreak.Info Mutation Situation Reports

The Andersen Lab at Scripps Research (USA)
Tracking the prevalence of several lineages or sets of mutations within the hCoV-19 genome

CoVariants

University of Bern (Switzerland)
SARS-CoV-2 variants and mutations of interest

Covid-Miner

Regina Elena National Cancer Institute (Italy)
Detect the emergence and geographical distribution of hCoV-19 Spike protein genetic varian
ts

COVID-19 CoV Genetics Browser

Broad Institute of MIT and Harvard (USA)
Track transmission, evolution, emergence, immune interactions, diagnostics, therapeutics & vaccines


CoronaTrend

The University of Hong Kong (Hong Kong)
Prevalence of different mutations across different lineages


assayM

King Abdullah University of Science & Technology (Saudi Arabia)
Track sensitivity of RT-PCR primers on variants


Wisconsin Genomic Dashboard

Wisconsin Department of Health Services (USA)
Summary reports on sequencing and variants of SARS-CoV-2 (hCoV-19)

CoV-Spectrum

Computational Evolution Group, ETH Zurich (Switzerland)
Fully interactive platform to explore and monitor variants of SARS-CoV-2

CoVerage

Helmholtz Centre for Infection Research (Germany)
Epidemiological dynamics of SARS-CoV-2 lineages

CovidTag 

IrsiCaixa AIDS Research Institute (Spain)
Average weekly hCoV-19 variants counts in Spain and Regions

CoVGlobe

The Francis Crick Institute (United Kingdom)
Aggregate three-week rolling averages of lineages in different locations

Regeneron COVID-19 Dashboard

Molecular Profiling & Data Science and Bioinformatics Core Services (USA)

Mutation Situation Reports

The Andersen Lab at Scripps Research (USA)
Tracking the prevalence of several lineages or sets of mutations within the hCoV-19 genome

CoVariants

University of Bern (Switzerland)
SARS-CoV-2 variants and mutations of interest

Covid-Miner

Regina Elena National Cancer Institute (Italy)
Detect the emergence and geographical distribution of hCoV-19 Spike protein genetic varian
ts

COVID-19 CoV Genetics Browser

Broad Institute of MIT and Harvard (USA)
Track transmission, evolution, emergence, immune interactions, diagnostics, therapeutics & vaccines